Figure 1.

Schematic overview of BreakTrans. Plotted as an example are three genes, A, B and C, that range from genomic positions (black nodes) a to c, d to g, and h to j, respectively. Each gene contains two exons (arrow boxes) that can be transcribed from 5' to 3'. Gene A is on the positive (+) strand, while genes B and C are on the negative (-) strand. Two sets of putative novel genomic breakpoints are identified from alignments: b+

Chen et al. Genome Biology 2013 14:R87   doi:10.1186/gb-2013-14-8-r87
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