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Volume 9 Suppl 1
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The editor's selection of refereed research articles published recently in BMC Genomics and BMC Bioinformatics
Baseline variation in toxicogenomic data
An inter-laboratory meta-analysis of more that 500 microarrays from the liver and kidney of control rats defined key sources of variability in control animals and will aid in the efficient design of future toxicogenomics experiments.
BMC Genomics 2008, 9:285

Better resolution of chromosome rearrangements
By comparing an organism's chromosomes to those of closely related species using a segmentation algorithm, breakpoints can be precisely delimited and their internal structure described, providing insights into the mechanisms and evolutionary properties of chromosomal rearrangements.
BMC Bioinformatics 2008, 9:286

Related journals
BMC Genomics
BMC Bioinformatics
BMC Systems Biology
BMC Medical Genomics
Gateways
Bioinformatics and Genomics Gateway
Microarrays Gateway
RNAi Gateway
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Faculty of 1000 Biology comprises well over 1,000 of the world's top scientists, who select and evaluate the most interesting articles published in the biological sciences, including Genomics and Genetics.
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 Welcome to Genome Biology
  Biology for the post-genomic era.

Method    
Hepatotoxin responses
Lobenhofer EK, Auman JT, Blackshear PE, Boorman GA, Bushel PR, Cunningham ML, Fostel JM, Gerrish K, Heinloth AN, Irwin RD, et al. / 20 June 2008

Histopathology, clinical chemistry, hematology and gene expression data were collected from the rat liver and blood after treatment with eight known hepatotoxins.

Review   
What makes pathogens pathogenic
Ehrlich GD, Hiller NL, Hu F / 24 June 2008

A review of the evolution of microbial pathogenicity in the context of the 'symbiome' of microbes and their multicellular hosts.

Research    
Cell cycle status in neurodegeneration
Wishart TM, Pemberton HM, James SR, McCabe CJ, Gillingwater TH / 20 June 2008

Profiling of gene expression changes in mice harbouring the neurodegenerative Wlds mutation shows a strong correlation between changes in cell cycle pathways and altered vulnerability of terminally differentiated neurons.

Protein family review   
The AID/APOBEC family of nucleic acid mutators
Conticello SG / 17 June 2008

An overview of the AID/APOBEC family of cytidine deaminases, enzymes that can mutate RNA and DNA.

Research    
Histone modifications in segmental duplications
Zheng D / 03 July 2008

A systematic analysis of histone modifications between human segmental duplications shows that two seemingly identical genomic copies have distinct epigenomic properties.

Minireview   
Does a new polyomavirus contribute to Merkel cell carcinoma?
Garneski KM, DeCaprio JA, Nghiem P / 17 June 2008

A new polyomavirus has been discovered in Merkel cell carcinomas, but does it contribute to carcinogenesis?

Method    
Vertebrate isochores
Schmidt T, Frishman D / 30 June 2008

A new consensus isochore assignment method and a database of isochore maps for all completely sequenced vertebrate genomes are presented.

Minireview   
A fruitful outcome to the papaya genome project
Wei F, Wing RA / 06 June 2008

Papaya provides the first draft genome sequence of a transgenic fruit.

The complete issue of Genome Biology Volume 9 Issue 6 is now available.

Comment   
Petsko GA / 23 June 2008
Research    
Monier A, Claverie JM, Ogata H / 03 July 2008
Meeting report   
Pepperkok R, Wiemann S / 01 July 2008
Software    
O'Connor BD, Day A, Cain S, Arnaiz O, Sperling L, Stein LD / 20 June 2008
Meeting report   
Ceron J, Swoboda P / 16 June 2008
Method    
Zhang Q, Menon R, Deutsch EW, Pitteri SJ, Faca VM, Wang H, Newcomb LF, DePinho RA, Bardeesy N, Dinulescu D, et al. / 03 June 2008
Meeting report   
Collins M, Winkler DG, Lin LL / 03 June 2008
Review    
Hammann C, Westhof E / 30 April 2007

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