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PROmiRNA: a new miRNA promoter recognition method uncovers the complex regulation of intronic miRNAs

Annalisa Marsico1*, Matthew R Huska1, Julia Lasserre1, Haiyang Hu2, Dubravka Vucicevic1, Anne Musahl1, Ulf Andersson Orom1 and Martin Vingron1

Author Affiliations

1 Max Planck Institute for Molecular Genetics, Ihnestrasse 63-73, 14195 Berlin, Germany

2 Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yue Yang Road, 200031 Shanghai, China

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Genome Biology 2013, 14:R84  doi:10.1186/gb-2013-14-8-r84

Published: 16 August 2013

Additional files

Additional file 1:

This file contains a detailed description of the data set used, the method and additional results.

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Open Data

Additional file 2:

This file contains a list of all identified human miRNA promoters, together with their genomic coordinates, computed posterior probabilities, regulatory features, tissue of expression and miRNA age.

Format: XLSX Size: 1.7MB Download file

Open Data

Additional file 3:

Format: XLSX Size: 957KB Download file

Open Data