Additional file 3.

Table S2. Summary of the functional annotation data obtained for the positive genes from the FIRMA analysis, using DAVID [76]. Fields: Category refers to the source of the functional annotation term; Term refers to the particular enriched annotation term; PValue refers to the raw P-value associated with the enrichment of the term; Genes refers to the gene symbols of those genes from the list that contribute to the enrichment of this term; Fold Enrichment refers to the level of enrichment of this term over the background distribution; Benjamini refers to the P-value for enrichment after correction for multiple testing according to the method of Benjamini and Hochberg [83]; ofInterest refers to whether this term was considered pertinent to our analysis.

Format: XLS Size: 36KB Download file

This file can be viewed with: Microsoft Excel Viewer

McGlincy et al. Genome Biology 2012 13:R54   doi:10.1186/gb-2012-13-6-r54