Additional file 1: Table S1.

Subject training set genes. List of 177 genes in the subject training set. All genes were previously found to be subject to XCI by expression analysis in somatic cell hybrids [10] (expression in 0 to 22% of examined somatic cell hybrids) and were also subject to XCI based on DNA methylation analysis in all tissues [13]. The expression of a subset of genes, marked with an asterisk, as examined in fibroblasts [10] also supports that these genes are subject to XCI (average of less than 10% Xi expression).

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Cotton et al. Genome Biology 2013 14:R122   doi:10.1186/gb-2013-14-11-r122