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MetAMOS: a modular and open source metagenomic assembly and analysis pipeline

Todd J Treangen12, Sergey Koren123, Daniel D Sommer1, Bo Liu13, Irina Astrovskaya1, Brian Ondov2, Aaron E Darling4, Adam M Phillippy2 and Mihai Pop13*

Author Affiliations

1 Center for Bioinformatics and Computational Biology, 3125 Biomolecular Sciences Bldg #296, University of Maryland, College Park, MD 20742, USA

2 National Biodefense Analysis and Countermeasures Center, 110 Thomas Johnson Drive, Frederick, MD 21702, USA

3 Department of Computer Science, AV Williams Building, University of Maryland, College Park, MD 20742, USA

4 Genome Center, 451 Health Sciences Drive, University of California, Davis, California 95616, USA

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Genome Biology 2013, 14:R2  doi:10.1186/gb-2013-14-1-r2

Published: 15 January 2013

Additional files

Additional file 1:

Figure S1 and Table S1.

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