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Functional analysis of transcription factor binding sites in human promoters

Troy W Whitfield1, Jie Wang1, Patrick J Collins2, E Christopher Partridge3, Shelley Force Aldred2, Nathan D Trinklein2, Richard M Myers3 and Zhiping Weng1*

Author Affiliations

1 Program in Bioinformatics and Integrative Biology and Department of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, Worcester, MA 01605, USA

2 SwitchGear Genomics, Menlo Park, CA 94025, USA

3 HudsonAlpha Institute for Biotechnology, Hunstville, AL 35806, USA

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Genome Biology 2012, 13:R50  doi:10.1186/gb-2012-13-9-r50

Published: 5 September 2012

Additional files

Additional file 1:

Supplementary Tables S1 to S4 and Figures S1 to S10, in portable document format (pdf).

Format: PDF Size: 716KB Download file

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Additional file 2:

Supplementary Table S5, data from luciferase assays, in tab-delimited text format.

Format: TXT Size: 81KB Download file

Open Data