Additional file 2.

Supplemental figures 1-5. Figure S1 plots sequencing depth versus RefSeq transcripts detected by 3SEQ. Figure S2 shows differential expression for the 23 peaks examined by qRT-PCR. Figure S3 plots the mean expression in cancer versus the mean expression in normal samples. Figure S4 shows expression of peak 13741 by 3SEQ, qRT-PCR and northern blot. Figure S5 is a browser shot showing the predicted breast transcripts near peak 13741.

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Brunner et al. Genome Biology 2012 13:R75   doi:10.1186/gb-2012-13-8-r75