Additional file 3.

Neighbor net based on all the SNPs. Tip labels were taken out for the sake of clarity. The network was constructed by means of SplitTree and shows extensive reticulation consistent with the conflicting phylogenetic signals created by recombination. Additionally, we used the Phi test also through SplitTree to further corroborate the presence of recombination. The test was statistically significant with a P-value equal to 0.

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Castillo-Ramírez et al. Genome Biology 2012 13:R126   doi:10.1186/gb-2012-13-12-r126