Additional file 7.
Enrichment analysis using the userListEnrichment function. The comma delimited file shows the results of a gene list enrichment analysis using the userListEnrichment function . This function was used to assess whether the top 1,000 aging-related module genes (highest average kMEgreen) are significantly enriched (hypergeometric test) with genes that are part of the brain-, blood- and stem cell-related lists curated from the literature. The userListEnrichment function was used to study the properties of lists of genes whose promoters contain CpG sites that are part of the aging related (green) module.
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Horvath et al. Genome Biology 2012 13:R97 doi:10.1186/gb-2012-13-10-r97