Additional file 8.
Figure S4d. Genome-wide visualization of PEmat and extAUC values for JPT. PEmat (cM) matrix values were scaled based on a maximum value of 2 cM, converted into grayscale levels, and plotted by chromosome. Cells with values ≥2 cM were set to black to compress and standardize the dynamic range. Red line: smoothed extAUC values were down-sampled. The scale for extAUC values is set separately to the maximum value observed across all autosomes or on chromosome X. Chromosomes are ordered by chromosomal base pair length.
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Johnson et al. Genome Biology 2011 12:R21 doi:10.1186/gb-2011-12-3-r21