An evaluation of the performance of MM-ChIP on ChIP-chip data is shown. (a) ROC curves of the analyses performed using either individual replicates or all replicates from a single ChIP-chip dataset generated using an Affymetrix array are plotted. (b) ROC curves of analyses from individual datasets and all three datasets are plotted. The integrative analyses on all three datasets were performed using MM-ChIP (red), majority voting (pink) or the region intersection method (yellow).
Chen et al. Genome Biology 2011 12:R11 doi:10.1186/gb-2011-12-2-r11