Additional file 3.

Alignments showing conserved protein-coding regions for representatives from each major family of TE identified in the D. pulex genome (a) Tc1/mariner superfamily, (b) Pogo (subfamily of Tc1/mariner), (c) Ant (subfamily of Tc1/mariner), (d) hAT, (e) P-element, (f) Mutator, (g) PIF/Harbinger, (h) Merlin, (i) CACTA, (j) Maverick.

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Schaack et al. Genome Biology 2010 11:R46   doi:10.1186/gb-2010-11-4-r46