Venn diagram of KEGG pathways identified as over-represented among the transcripts significantly up- or down-regulated (FDR <0.1) in the different stress conditions. Only KEGG pathways with q-values < 0.1 in at least two conditions or for both datasets (FDR of 0.05 and FDR of 0.1) were considered. The general category 'other enzymes' was not included. Further 'SNARE interactions in vesicular transport' includes the category 'SNARE', and 'photosynthesis' includes 'photosynthesis proteins' and 'porphyrin and chlorophyll metabolism'. No pathways were found to be common only to hyposaline and hypersaline stress. SNARE, soluble N-ethylmaleimide-sensitive factor attachment receptor.
Dittami et al. Genome Biology 2009 10:R66 doi:10.1186/gb-2009-10-6-r66