Log on / register
BioMed Central home | Journals A-Z | Feedback | Support | My details
.refereed research
 |  |  |  |  | 


Open AccessHighly AccessMethod

Gene expression response in target organ and whole blood varies as a function of target organ injury phenotype

Edward K Lobenhofer1 email, J Todd Auman2,11 email, Pamela E Blackshear3 email, Gary A Boorman4 email, Pierre R Bushel5 email, Michael L Cunningham4 email, Jennifer M Fostel6,7 email, Kevin Gerrish2 email, Alexandra N Heinloth2 email, Richard D Irwin4 email, David E Malarkey8 email, B Alex Merrick7 email, Stella O Sieber2 email, Charles J Tucker2 email, Sandra M Ward8 email, Ralph E Wilson8 email, Patrick Hurban1 email, Raymond W Tennant* 9 email and Richard S Paules* 10 email

1Cogenics, a Division of Clinical Data, Inc., Morrisville, NC 27560, USA

2NIEHS Microarray Group, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC 27709, USA

3Integrated Laboratory Systems, Inc., Research Triangle Park, NC 27709, USA

4National Toxicology Program, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC 27709, USA

5Biostatistics Branch, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC 27709, USA

6National Center for Toxicogenomics, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC 27709, USA

7Laboratory of Respiratory Biology, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC 27709, USA

8Laboratory of Experimental Pathology, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC 27709, USA

9Cancer Biology Group, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC 27709, USA

10Environmental Stress and Cancer Group, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC 27709

11Current address: Institute for Pharmacogenomics and Individualized Therapy, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA

author email corresponding author email* Contributed equally

Genome Biology 2008, 9:R100doi:10.1186/gb-2008-9-6-r100

Published: 20 June 2008

Subject areas: Genome studies, Medicine, Physiology


Additional files

Additional data file 1:

Histopathological scores as well as the clinical chemistry and hematology data that were generated for each animal in this project.

Format: ZIP Size: 165KB Download file

Additional data file 2:

Agilent probe identifiers that resulted from the SVM analyses detailed in the Results section.

Format: ZIP Size: 38KB Download file

Additional data file 3:

Enrichment p-values that resulted from performing a GO enrichment analysis on the list of classifiers for each dose/time/tissue group. GO categories must have had at least five associated genes measured on the microarray in order to be included.

Format: XLS Size: 564KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional data file 4:

Observations and measurements made during the in-life portion of the project.

Format: ZIP Size: 40KB Download file

Additional data file 5:

Scoring method used for the histopathological observations made in this project.

Format: DOCX Size: 15KB Download file


© 1999-2008 BioMed Central Ltd unless otherwise stated. Part of Springer Science+Business Media.