Additional data file 1.

Table S1: cDNA transcript structures correctly predicted by G-Mo.R-Se and Velvet. Table S2: support (in public resources) of G-Mo.R-Se models that do not overlap cDNAs. Figure S1: proportions of exon fusions and exon splits obtained with different depth thresholds for the covtig construction step. Figure S2: example of a novel model.

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Denoeud et al. Genome Biology 2008 9:R175   doi:10.1186/gb-2008-9-12-r175